BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012H06LP1|AL426432
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1336 0.0
>3x_Contig1555
Length = 10828
Score = 1336 bits (673), Expect = 0.0
Identities = 690/695 (99%), Gaps = 1/695 (0%)
Strand = Plus / Minus
Query: 105 tgaatgaagtgtgtttttatatacatatacactgtaaggacgttcacatgtagatgaggg 164
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10828 tgaatgaagtgtgggtttatatacatatacactgtaaggacgttcacatgtagatgaggg 10769
Query: 165 aaggagctttttactgccatgcaaaatttatcttagaacgcgctcaagttcggacaaaca 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10768 aaggagctttttactgccatgcaaaatttatcttagaacgcgctcaagttcggacaaaca 10709
Query: 225 ccc-atatttttttgatttccatgttttcgactgagaagtattccaatctgtagaatcat 283
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10708 ccccatatttttttgatttccatgttttcgactgagaagtattccaatctgtagaatcat 10649
Query: 284 ccgtagtcagggtcacagatgacctagagtactgttcgaattgtgatatcaggaactgtt 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10648 ccgtagtcagggtcacagatgacctagagtactgttcgaattgtgatatcaggaactgtt 10589
Query: 344 tcacttcatcgtggttgaacggtggtttagaatgaacatatgatgcttggttcgtttggg 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10588 tcacttcatcgtggttgaacggtggtttagaatgaacatatgatgcttggttcgtttggg 10529
Query: 404 aattctgcccattgctgttgttattttttttcttgttactgcgtgagttctgcgaagaga 463
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 10528 aattctgcccattgctgttgttattttttttcttgttactgcgtgagtcctgcgaagaga 10469
Query: 464 tactacttctactggtattttcacttgttactggagtaggaatggctgaagcagaagtgg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10468 tactacttctactggtattttcacttgttactggagtaggaatggctgaagcagaagtgg 10409
Query: 524 gagaagcggtcgtatatgccatacttttttttttcaacgcagagctttcacttccccaag 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10408 gagaagcggtcgtatatgccatacttttttttttcaacgcagagctttcacttccccaag 10349
Query: 584 caccaagtttcttactttgccaagcattagccattgttaagcagtgtataggaaaaccgg 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10348 caccaagtttcttactttgccaagcattagccattgttaagcagtgtataggaaaaccgg 10289
Query: 644 atggataattctatttattcccaacggaaaagtacgttaccagacggcgaaagagagatc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10288 atggataattctatttattcccaacggaaaagtacgttaccagacggcgaaagagagatc 10229
Query: 704 ctatggaaatacaatcgtgtacacaaggaacgatttgatggagcttacttccgctctacc 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10228 ctatggaaatacaatcgtgtacacaaggaacgatttgatggagcttacttccgctctacc 10169
Query: 764 ttgacgattgtwacaactgatcaaaggaatatgcc 798
||||||||||| |||||||||||||||||||||||
Sbjct: 10168 ttgacgattgttacaactgatcaaaggaatatgcc 10134
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7892
Number of Sequences: 1807
Number of extensions: 7892
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)